Parallel Reconfigurable Operator for Genomic Sequence Comparison: Architecture and Performance Analyses
Résumé
This document describes a parallel genomic sequence comparison operator for reconfigurable platforms. It has been implemented for speeding up the time consuming parts of the IRISA-TBLASTN program designed for comparing full genomes with large protein banks. Speed-up ranging from 25 to 200 has been measured on real genomic data.
Domaines
Architectures Matérielles [cs.AR]
Origine : Fichiers produits par l'(les) auteur(s)
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