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hal-00687531v1  Conference papers
Antonio MucherinoCarlile LavorL. LibertiE.-G. Talbi. A Parallel Version of the Branch & Prune Algorithm for the Molecular Distance Geometry Problem
Computer Systems and Applications (AICCSA), 2010 IEEE/ACS International Conference on, May 2010, Hammamet, Tunisia. ⟨10.1109/AICCSA.2010.5586983⟩
hal-01093066v1  Book sections
Jeongyeon SeoJae-Kwan KimJoonghyun RyuCarlile LavorAntonio Mucherino et al.  BetaMDGP: Protein Structure Determination Algorithm Based on the Beta-complex
M.L. Gavrilova; C.J.K. Tan. Transactions on Computational Science XXII, Lecture Notes in Computer Science (8360), Springer, pp.130-155, 2014
hal-00912689v1  Book sections
Leo LibertiCarlile LavorAntonio Mucherino. The Discretizable Molecular Distance Geometry Problem seems Easier on Proteins
Mucherino, Antonio and Lavor, Carlile and Liberti, Leo and Maculan, Nelson. Distance Geometry: Theory, Methods and Applications, Springer, pp.47-60, 2013
hal-01202376v1  Directions of work or proceedings
Antonio MucherinoRosiane de FreitasCarlile Lavor. Distance Geometry and Applications
special issue of Discrete Applied Mathematics, France. 197, 2015
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hal-03030154v1  Conference papers
Antonio MucherinoDouglas GonçalvesLeo LibertiJung-Hsin LinCarlile Lavor et al.  MD-JEEP: a New Release for Discretizable Distance Geometry Problems with Interval Data
FedCSIS 2020 - 15th Conference on Computer Science and Information Systems, Sep 2020, Sofia, Bulgaria. pp.1-6
inria-00637771v1  Conference papers
Antonio MucherinoCarlile LavorLeo Liberti. A symmetry-driven BP algorithm for the Discretizable Molecular Distance Geometry Problem
IEEE International Conference on Bioinformatics and Biomedicine, Nov 2011, Atlanta, United States
hal-00756943v1  Journal articles
Antonio MucherinoCarlile LavorLeo Liberti. The Discretizable Distance Geometry Problem
Optimization Letters, Springer Verlag, 2012, 6 (8), pp.1671-1686
hal-01196714v1  Book sections
Douglas S. GonçalvesJacques NicolasAntonio MucherinoCarlile Lavor. Finding Optimal Discretization Orders for Molecular Distance Geometry by Answer Set Programming
S. Fidanova. Studies in Computational Intelligence, 610, Springer, pp.1-15, 2015, Recent Advances in Computational Optimization
hal-00756941v1  Journal articles
Antonio MucherinoCarlile LavorLee JonJohn Lee S.Leo Liberti et al.  Discretization Orders for Distance Geometry Problems
Optimization Letters, Springer Verlag, 2012, 6 (4), pp.783-796
hal-01402390v1  Conference papers
Warley GramachoAntonio MucherinoJung-Hsin LinCarlile Lavor. A New Approach to the Discretization of Multidimensional Scaling
IEEE Conference Proceedings of FedCSIS16, Sep 2016, Gandz, Poland
hal-00912698v1  Conference papers
Rafael AlvesAndrea CassioliAntonio MucherinoCarlile LavorLeo Liberti. Adaptive Branching in iBP with Clifford Algebra
Distance Geometry and Applications (DGA13), Jun 2013, Manaus, Amazonas, Brazil. pp.65-69
hal-00912670v1  Conference papers
Douglas GonçalvesAntonio MucherinoCarlile Lavor. Energy-based Pruning Devices for the BP algorithm for Distance Geometry
Workshop on Computational Optimization, Sep 2013, Krakow, Poland. pp.335-340
hal-01093063v1  Conference papers
Douglas GonçalvesAntonio MucherinoCarlile Lavor. An Adaptive Branching Scheme for the Branch & Prune Algorithm applied to Distance Geometry
Federated Conference on Computer Science and Information Systems (FedCSIS14), Workshop on Computational Optimization (WCO14), Sep 2014, Warsaw, Poland. pp.463-469
hal-00756939v1  Journal articles
Antonio MucherinoCarlile LavorLeo Liberti. Exploiting Symmetry Properties of the Discretizable Molecular Distance Geometry Problem
Journal of Bioinformatics and Computational Biology, World Scientific Publishing, 2012, 10 (3), pp.1242009(1-15)
hal-01093052v1  Journal articles
Virginia CostaAntonio MucherinoCarlile LavorAndrea CassioliLuiz Mariano Carvalho et al.  Discretization Orders for Protein Side Chains
Journal of Global Optimization, Springer Verlag, 2014, 60 (2), pp.333-349
hal-00756945v1  Conference papers
Antonio MucherinoCarlile LavorLeo LibertiNelson Maculan. On the Discretization of Distance Geometry Problems
Mathematics of Distances and Applications 2012 (MDA12), 2012, Varna, Bulgaria
hal-00756947v1  Conference papers
Antonio MucherinoGramacho WarleyCarlile LavorNelson Maculan. A Parallel BP Algorithm for the Discretizable Distance Geometry Problem
Workshop on Parallel Computing and Optimization (PCO12), 26th IEEE International Parallel & Distributed Processing Symposium (IPDPS12), 2012, Shanghai, China
hal-00756944v1  Conference papers
Antonio MucherinoCosta VirginiaCarvalho Luiz MarianoCarlile LavorNelson Maculan. On Suitable Orders for Discretizing Molecular Distance Geometry Problems related to Protein Side Chains
IEEE Conference Proceedings, Federated Conference on Computer Science and Information Systems (FedCSIS12), Workshop on Computational Optimization (WCO12), 2012, Warsaw, Poland
hal-00756946v1  Conference papers
Antonio MucherinoCarlile LavorLeo LibertiNelson Maculan. Finding Low-Energy Homopolymer Conformations by a Discrete Approach
Global Optimization Workshop 2012 (GOW12), 2012, Natal, Brazil
hal-01093056v1  Journal articles
Leo LibertiCarlile LavorNelson MaculanAntonio Mucherino. Euclidean Distance Geometry and Applications
SIAM Review, Society for Industrial and Applied Mathematics, 2014, 56 (1), pp.3-69
hal-00756942v1  Journal articles
Antonio MucherinoCarlile LavorLeo LibertiNelson Maculan. Recent Advances on the Discretizable Molecular Distance Geometry Problem
European Journal of Operational Research, Elsevier, 2012, 219, pp.698-706
hal-00756940v1  Journal articles
Antonio MucherinoCarlile LavorLeo LibertiNelson Maculan. The Discretizable Molecular Distance Geometry Problem
Computational Optimization and Applications, Springer Verlag, 2012, 52, pp.115-146
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hal-02105295v1  Journal articles
Douglas GonçalvesAntonio MucherinoCarlile LavorLeo Liberti. Recent advances on the interval distance geometry problem
Journal of Global Optimization, Springer Verlag, 2017, 69 (3), pp.525-545. ⟨10.1007/s10898-016-0493-6⟩