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hal-00779835v1  Journal articles
R. Castro, L. Jouneau, Hp Pham, O. Bouchez, V. Giudicelli et al.  Teleost Fish Mount Complex Clonal IgM and IgT Responses in Spleen upon Systemic Viral Infection
PLoS Pathogens, Public Library of Science, 2013, 9 (1), pp.e1003098. ⟨10.1371/journal.ppat.1003098⟩
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hal-01675467v1  Journal articles
Simon Marillet, Marie-Paule Lefranc, Pierre Boudinot, Frédéric Cazals. Novel Structural Parameters of Ig–Ag Complexes Yield a Quantitative Description of Interaction Specificity and Binding Affinity
Frontiers in Immunology, Frontiers, 2017, 8, pp.34. ⟨10.3389/fimmu.2017.00034⟩
hal-02425599v1  Journal articles
Frédéric Cazals, Dorian Mazauric, Romain Tetley, Rémi Watrigant. Comparing Two Clusterings Using Matchings between Clusters of Clusters
ACM Journal of Experimental Algorithmics, Association for Computing Machinery, 2019, 24 (1), pp.1-41. ⟨10.1145/3345951⟩
hal-02425596v1  Journal articles
Frédéric Cazals, Romain Tetley. Characterizing molecular flexibility by combining least root mean square deviation measures
Proteins - Structure, Function and Bioinformatics, Wiley, 2019, 87 (5), pp.380-389. ⟨10.1002/prot.25658⟩
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hal-01919860v3  Journal articles
Augustin Chevallier, Frédéric Cazals. Wang-Landau Algorithm: an adapted random walk to boost convergence
Journal of Computational Physics, Elsevier, 2019, pp.1-34. ⟨10.1016/j.jcp.2020.109366⟩
hal-01968190v1  Journal articles
Alix Lhéritier, Frédéric Cazals. A Sequential Non-Parametric Multivariate Two-Sample Test
IEEE Transactions on Information Theory, Institute of Electrical and Electronics Engineers, 2018, 64 (5), pp.3361-3370
hal-01968170v1  Journal articles
Carlos Oscar Sorzano, A. Jiménez, Javier Mota, José Luis Vilas, David Maluenda et al.  Survey of the analysis of continuous conformational variability of biological macromolecules by electron microscopy
Acta crystallographica. Section F, Structural biology communications, John Wiley & Sons Ltd,, 2019, 75 (1), pp.19-32. ⟨10.1107/S2053230X1801510⟩
hal-01423280v1  Journal articles
Joanne Carr, Dorian Mazauric, Frédéric Cazals, David John Wales. Energy landscapes and persistent minima
Journal of Chemical Physics, American Institute of Physics, 2016, 144 (5), ⟨10.1063/1.4941052⟩
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hal-01377738v1  Journal articles
Sergei Grudinin, Maria Kadukova, Andreas Eisenbarth, Simon Marillet, Frédéric Cazals. Predicting binding poses and affinities for protein-ligand complexes in the 2015 D3R Grand Challenge using a physical model with a statistical parameter estimation
Journal of Computer-Aided Molecular Design, Springer Verlag, 2016, 30 (9), pp.791-804. ⟨10.1007/s10822-016-9976-2⟩
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hal-01245401v2  Journal articles
Deepesh Agarwal, Christelle Caillouet, David Coudert, Frédéric Cazals. Unveiling Contacts within Macro-molecular assemblies by solving Minimum Weight Connectivity Inference Problems
Molecular and Cellular Proteomics, American Society for Biochemistry and Molecular Biology, 2015, 14, pp.2274-2284. ⟨10.1074/mcp.M114.047779⟩
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inria-00329731v1  Journal articles
Frédéric Cazals, Marc Pouget. Jet fitting 3: A Generic C++ Package for Estimating the Differential Properties on Sampled Surfaces via Polynomial Fitting
ACM Transactions on Mathematical Software, Association for Computing Machinery, 2008, 35 (3)
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hal-01110229v1  Journal articles
Frédéric Cazals, Tom Dreyfus, S Sachdeva, N Shah. Greedy Geometric Algorithms for Collection of Balls, with Applications to Geometric Approximation and Molecular Coarse-Graining
Computer Graphics Forum, Wiley, 2014, 33, pp.1 - 17. ⟨10.1111/cgf.12270⟩
hal-00849822v1  Journal articles
Sébastien Loriot, Frédéric Cazals. Modeling Macro-Molecular Interfaces with Intervor
Bioinformatics, Oxford University Press (OUP), 2010, 26 (7), pp.964-965. ⟨10.1093/bioinformatics/btq052⟩
hal-00849819v1  Journal articles
Frédéric Cazals, David Cohen-Steiner. Reconstructing 3D compact sets
Computational Geometry, Elsevier, 2011, 45 (1-2), pp.1--13. ⟨10.1016/j.comgeo.2011.07.005⟩
hal-00849809v1  Journal articles
Frédéric Cazals, Kanhere Harshad, Sébastien Loriot. Computing the Volume of Union of Balls: a Certified Algorithm
ACM Transactions on Mathematical Software, Association for Computing Machinery, 2011, 38 (1), ⟨10.1145/2049662.2049665⟩
hal-00849793v1  Journal articles
Noël Malod-Dognin, Achin Bansal, Frédéric Cazals. Characterizing the Morphology of Protein Binding Patches
Proteins - Structure, Function and Bioinformatics, Wiley, 2012, 80 (12), pp.2652--2665. ⟨10.1002/prot.24144⟩
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hal-00796092v1  Journal articles
Sebastien Loriot, Sushant Sachdeva, Karine Bastard, Chantal Prevost, Frédéric Cazals. On the Characterization and Selection of Diverse Conformational Ensembles, with Applications to Flexible Docking
IEEE/ACM Transactions on Computational Biology and Bioinformatics, Institute of Electrical and Electronics Engineers, 2011, 8 (2), pp.487-498. ⟨10.1109/TCBB.2009.59⟩
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hal-00796032v1  Journal articles
Benjamin Bouvier, Raik Grünberg, Michael Nilges, Frédéric Cazals. Shelling the Voronoi interface of protein-protein complexes reveals patterns of residue conservation, dynamics and composition
Proteins - Structure, Function and Bioinformatics, Wiley, 2009, 76 (3), pp.677-692. ⟨10.1002/prot.22381⟩
hal-00764009v1  Journal articles
Tom Dreyfus, Valérie Doye, Frédéric Cazals. Assessing the reconstruction of macromolecular assemblies with toleranced models.
Proteins - Structure, Function and Bioinformatics, Wiley, 2012, 80 (9), pp.2125-36. ⟨10.1002/prot.24092⟩