M. Kathol, H. Fischer, and M. Weitere, Contribution of biofilm-dwelling consumers to pelagic-benthic coupling in a large river, Freshwater Biology, vol.52, issue.256, pp.1160-1172, 2011.
DOI : 10.1111/j.1365-2427.2010.02561.x

V. Korte and D. Blinn, Diatom colonization on artificial substrata in pool and riffle zones studied by light and scanning electron microscopy Bacillariophyceae, Vols 1 to 4 Micro scale evaluation of the effects of grazing by invertebrates with contrasting feeding modes on river biofilm architecture and composition, J Phycol Microb Ecol, vol.19, issue.44, pp.199-207, 1983.

J. Leflaive and L. Ten-hage, Algal and cyanobacterial secondary metabolites in freshwaters: a comparison of allelopathic compounds and toxins, Freshwater Biology, vol.198, issue.2, pp.199-214, 2007.
DOI : 10.1002/tox.10065
URL : https://hal.archives-ouvertes.fr/hal-00275903

J. Leflaive, S. Boulêtreau, E. Buffan-dubau, and L. Ten-hage, Temporal patterns in epilithic biofilm ? relation with a putative allelopathic activity Invited review: direct and indirect effects in herbivore?periphyton interactions, Fundam Appl Limnol Arch Hydrobiol, vol.173, issue.159, pp.433-453, 2004.

M. Lock, R. Wallace, J. Costerton, R. Ventullo, S. Charlton et al., River epilithon: toward a structural-functional model Bacterial community succession in natural river biofilm assemblages, Oikos Microb Ecol, vol.42, issue.50, pp.589-601, 1984.

E. Lyautey, B. Lacoste, L. Ten-hage, J. Rols, F. Garabetian et al., Analysis of bacterial diversity in river biofilms using 16s rDNA PCR-DGGE: methodological settings and fingerprints interpretation CHEMTAX ? a program for estimating class abundances from chemical markers: application to HPLC measurements of phytoplankton, Water Res Mar Ecol Prog Ser, vol.39, issue.144, pp.380-388, 1996.

N. Majdi, W. Traunspurger, S. Boyer, B. Mialet, and . Others, Response of biofilm-dwelling nematodes to habitat changes in the Garonne River, France: influence of hydrodynamics and microalgal availability, Hydrobiologia, vol.10, issue.1, pp.229-244, 2011.
DOI : 10.1007/s10750-011-0781-6
URL : https://hal.archives-ouvertes.fr/hal-00959377

N. Majdi, B. Mialet, S. Boyer, M. Tackx, and . Others, The relationship between epilithic biofilm stability and its associated meiofauna under two patterns of flood disturbance, Freshwater Science, vol.31, issue.1, pp.38-50, 2012.
DOI : 10.1899/11-073.1
URL : https://hal.archives-ouvertes.fr/hal-00815302

N. Majdi, M. Tackx, and E. Buffan-dubau, Trophic positioning and microphytobenthic carbon uptake of biofilm-dwelling meiofauna in a temperate river, Freshwater Biology, vol.40, issue.6, pp.1180-1190, 2012.
DOI : 10.1111/j.1365-2427.2012.02784.x
URL : https://hal.archives-ouvertes.fr/hal-00831572

N. Majdi, M. Tackx, W. Traunspurger, and E. Buffan-dubau, Feeding of biofilm-dwelling nematodes examined using HPLC-analysis of gut pigment contents, Hydrobiologia, vol.77, issue.1, pp.219-232, 2012.
DOI : 10.1007/s10750-011-0920-0

M. Mathieu, J. Leflaive, L. Ten-hage, R. De-wit, and E. Buffan-dubau, Free-living nematodes affect oxygen turnover of artificial diatom biofilms Diatom ecological guilds display distinct and predictable behaviour along nutrient and disturbance gradients in running waters, Aquat Microb Ecol Aquat Bot, vol.49, issue.86, pp.171-178, 2007.

C. Peterson, K. Hoagland, and R. Stevenson, Timing of Wave Disturbance and the Resistance and Recovery of a Freshwater Epilithic Microalgal Community, Journal of the North American Benthological Society, vol.9, issue.1, pp.54-67, 1990.
DOI : 10.2307/1467934

E. Phlips, M. Cichra, F. Aldridge, J. Jembeck, J. Hendrickson et al., Light availability and variations in phytoplankton standing crops in a nutrient-rich blackwater river, Limnology and Oceanography, vol.45, issue.4, pp.916-929, 2000.
DOI : 10.4319/lo.2000.45.4.0916

M. Pusch, D. Fiebig, I. Brettar, H. Eisenmann, and . Others, The role of micro-organisms in the ecological connectivity of running waters, Freshwater Biology, vol.23, issue.3, pp.453-495, 1998.
DOI : 10.1016/S0022-1694(97)00064-4

C. Reynolds, J. Descy, and J. Padisak, Are phytoplankton dynamics in rivers so different from those in shallow lakes?, Hydrobiologia, vol.11, issue.1-3, pp.1-7, 1994.
DOI : 10.1007/BF00007404

D. Roeder, A. Romaní, H. Guasch, and I. Munoz, Relationships between phytoplankton and periphyton communities in a central Iowa stream Biofilm structure and function and possible implications for riverine DOC dynamics, Hydrobiologia Ruana J and others Microb Ecol, vol.56, issue.47, pp.316-328, 1977.

S. Sabater, H. Guasch, A. Romaní, and I. Muñoz, The effect of biological factors on the efficiency of river biofilms in improving water quality, Hydrobiologia, vol.469, issue.1/3, pp.149-156, 2002.
DOI : 10.1023/A:1015549404082

S. Sabater, E. Vilalta, A. Gaudes, H. Guasch, I. Munoz et al., Ecological implications of mass growth of benthic cyanobacteria in rivers, Aquatic Microbial Ecology, vol.32, issue.404, pp.175-184, 2003.
DOI : 10.3354/ame032175

K. Soetaert, P. Herman, A. Steinman, C. Mcintire, S. Gregory et al., Carbon flows in the Westerschelde estuary (The Netherlands) evaluated by means of an ecosystem model (MOSES) Effects of herbivore type and density on taxonomic structure and physiognomy of algal assemblages in laboratory streams, Hydrobiologia J N Am Benthol Soc, vol.311, issue.6, pp.247-266, 1987.

S. Teissier, T. M. Delmas, F. Garabetian, and F. , Detailing biogeochemical N budgets in riverine epilithic biofilms, Journal of the North American Benthological Society, vol.26, issue.2, pp.178-190, 2007.
DOI : 10.1899/0887-3593(2007)26[178:DBNBIR]2.0.CO;2

T. Braak and C. , (eds) Data analysis in community and landscape ecology, pp.91-173, 1987.

T. Braak and C. , Canonical community ordination, Part I: basic theory and linear methods CANOCO reference manual and CanoDraw for windows user's guide ? software for canonical community ordination (Version 4.5) Microcomputer Power Variable discharge alters habitat suitability for benthic algae and cyanobacteria in a forested Mediterranean stream Periphyton dynamics in a floodprone prealpine river: evaluation of significant processes by modelling, Ecoscience Mar Freshw Res Freshw Biol, vol.1, issue.36, pp.249-263, 1994.

R. Vannote, G. Minshall, K. Cummins, J. Sedell, and C. Cushing, The River Continuum Concept, Canadian Journal of Fisheries and Aquatic Sciences, vol.37, issue.1, pp.130-137, 1980.
DOI : 10.1139/f80-017