Visualization of grapevine root colonization by the Saharan soil isolate Saccharothrix algeriensis NRRL B-24137 using DOPE-FISH microscopy
Résumé
Background and aim There is currently a gap of
knowledge regarding whether some beneficial bacteria
isolated from desert soils can colonize epi- and
endophytically plants of temperate regions. In this
study, the early steps of the colonization process of
one of these bacteria, Saccharothrix algeriensis NRRL
B-24137, was studied on grapevine roots to determine
if this beneficial strain can colonize a non-natural host
plant. An improved method of fluorescence in situ
hybridization (FISH), the double labeling of oligonucleotide
probes (DOPE)-FISH technique was used to
visualize the colonization behavior of such bacteria as well as to determine if the method could be used to
track microbes on and inside plants.
Methods A probe specific to Saccharothrix spp. was
firstly designed. Visualization of the colonization behavior
of S. algeriensis NRRL B-24137 on and inside
roots of grapevine plants was then carried out with
DOPE-FISH microscopy.
Results The results showed that 10 days after inoculation,
the strain could colonize the root hair zone, root
elongation zone, as well as root emergence sites by
establishing different forms of bacterial structures as
revealed by the DOPE-FISH technique. Further observations
showed that the strain could be also endophytic
inside the endorhiza of grapevine plants.
Conclusions Taking into account the natural niches of
this beneficial strain, this study exemplifies that, in
spite of its isolation from desert soil, the strain can
establish populations as well as subpopulations on and
inside grapevine plants and that the DOPE-FISH tool
can allow to detect it.
Domaines
Génie chimique
Origine : Fichiers produits par l'(les) auteur(s)
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