Transcriptomic and cell wall proteomic datasets of rosettes and floral stems from five Arabidopsis thaliana ecotypes grown at optimal or sub-optimal temperature

Harold Duruflé (1) , Philippe Ranocha (2) , Thierry Balliau (3) , Christophe Dunand (2) , Elisabeth Jamet (2)

1 LRSV - Laboratoire de Recherche en Sciences Végétales
2 Dynamique et Evolution des Parois cellulaires végétales
3 GQE-Le Moulon - Génétique Quantitative et Evolution - Le Moulon (Génétique Végétale)

This article provides experimental data describing the RNA and the cell wall protein profiles of rosettes and flower stems of five Arabidopsis thaliana ecotypes. Four newly-described Pyrenees ecotypes [1] are analyzed in addition to the well-described and sequenced Columbia (Col) ecotype of A. thaliana. All five ecotypes have been grown at two different temperatures, 22 degrees C and 15 degrees C. We provide transcriptomics and cell wall proteomics data regarding (i) rosettes at the bolting stage, and (ii) floral stems at the first flower stage. These data are a valuable resource to study the adaptation of A. thaliana ecotypes to sub-optimal temperature growth conditions. (c) 2019 The Authors. Published by Elsevier Inc. This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).

Mots clés: Arabidopsis thaliana; Cell wall; Proteomics; Pyrenees ecotype; Transcriptomics

Domaines: Technologies Émergeantes [cs.ET]; Sciences de l'ingénieur [physics]

Harold Duruflé, Philippe Ranocha, Thierry Balliau, Christophe Dunand, Elisabeth Jamet. Transcriptomic and cell wall proteomic datasets of rosettes and floral stems from five Arabidopsis thaliana ecotypes grown at optimal or sub-optimal temperature. Data in Brief, 2019, 27, pp.104581. ⟨10.1016/j.dib.2019.104581⟩. ⟨hal-02938744⟩